Relevant Recent Papers by Participants

Archer, L. C., S. A. Hutton, L. Harman, S. D. McCormick, M. N. O’Grady, J. P. Kerry, W. R. Poole, P. Gargan, P. McGinnity, and T. E. Reed. 2020. Food and temperature stressors have opposing effects in determining flexible migration decisions in brown trout (Salmo trutta). Global Change Biology 26. doi:10.1111/gcb.14990

Barany, A., C. A. Shaughnessy, J. Fuentes, J. M. Mancera, and S. D. McCormick. 2020. Osmoregulatory role of the intestine in the sea lamprey (Petromyzon marinus). American Journal of Physiology – Regulatory Integrative and Comparative Physiology 318:R410-R417. doi:10.1152/ajpregu.00033.2019

Davis, A., B. Pusey, and R. Betancur-R. 2020. Effects of adoption of freshwater residency on life-history ecology of terapontid grunters. Freshwater Biology 65: 1139–1152. doi: 10.1111/fwb.13499

dos Reis Cuenca, A., M. Souza, and C. Freire. 2021. Osmoregulatory power influences tissue ionic composition after salinity acclimation in aquatic decapods. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology 259:111001. doi: 10.1016/j.cbpa.2021.111001

Erséus, C., B. W. Williams, K. M. Horn, K. M. Halanych, S. R. Santos, S. W. James, M. Creuzé des Châtelliers, and F. E. Anderson. 2020. Phylogenomic analyses reveal a Palaeozoic radiation and support a freshwater origin for clitellate annelids. Zoologica Scripta 49:614-640. doi: 10.1111/zsc.12426

Ferreira-Martins, D., J. M. Wilson, S. P. Kelly, D. Kolosov, and S. D. McCormick. 2021. A review of osmoregulation in lamprey. Journal of Great Lakes Research. doi:10.1016/j.jglr.2021.05.003

Ghalambor, C. K., E. S. Gross, E. D. Grosholz, K. M. Jeffries, J. L. Largier, S. D. McCormick, T. Sommer, J. P. Velotta, and A. Whitehead. 2021. Ecological effects of climate-driven salinity variation in the San Francisco Estuary: Can we anticipate and manage the coming changes? San Francisco Estuary and Watershed Science 19:article 3. doi:10.15447/sfews.2021v19iss2art3

Gong, N., D. Ferreira-Martins, S. D. McCormick, and M. A. Sheridan. 2020. Divergent genes encoding the putative receptors for growth hormone and prolactin in sea lamprey display distinct patterns of expression. Scientific Reports 10:1674. doi:10.1038/s41598-020-58344-5

Hernandez-Hernandez, T., E. C. Miller, C. Roman-Palacios, and J. J. Wiens. 2021. Speciation across the Tree of Life. Biological Reviews (Cambridge) 96:1205-1242. doi: 10.1111/brv.12698

Horn, K. M., and F. E. Anderson. 2020. Spiralian Genomes Reveal Gene Family Expansions Associated with Adaptation to Freshwater. Journal of Molecular Evolution 88:463-472. doi: 10.1007/s00239-020-09949-x

Hughes, L., Y. Cardoso, J. Sommer, R. Cifuentes, M. Cuello, G. Somoza, M. González-Castro, L. Malabarba, V. Cussac, E. Habit, R. Betancur-R, and G. Orti. 2020. Biogeography, habitat transitions and hybridization in a radiation of South American silverside fishes revealed by mitochondrial and genomic RAD data. Molecular Ecology 29: 738–751. doi: 10.1111/mec.15350

Hutchins, P. R., A. J. Sepulveda, H. Hartikainen, K. D. Staigmiller, S. T. Opitz, R. M. Yamamoto, A. Huttinger, R. J. Cordes, T. Weiss, L. R. Hopper, M. K. Purcell, and B. Okamura. 2021. Exploration of the 2016 Yellowstone River fish kill and proliferative kidney disease in wild fish populations. Ecosphere 12:e03436. doi: 10.1002/ecs2.3436

Kjaerner-Semb, E., R. B. Edvardsen, F. Ayllon, P. Vogelsang, T. Furmanek, C. J. Rubin, A. E. Veselov, T. O. Nilsen, S. D. McCormick, C. R. Primmer, and A. Wargelius. 2021. Comparison of anadromous and landlocked Atlantic salmon genomes reveals signatures of parallel and relaxed selection across the Northern Hemisphere. Evolutionary Applications 14: 446–461. doi: 10.1111/eva.13129

Kolmann, M. A., M. D. Burns, J. Y. K. Ng, N. R. Lovejoy, and D. D. Bloom. 2020. Habitat transitions alter the adaptive landscape and shape phenotypic evolution in needlefishes (Belonidae). Ecology and Evolution 10:3769-3783. doi: 10.1002/ece3.6172

Lee, C. E. 2021. Ion Transporter Gene Families as Physiological Targets of Natural Selection During Salinity Transitions in a Copepod. Physiology 36:335-349. doi: 10.1152/physiol.00009.2021

Mantovani, M., and J. McNamara. 2020. Contrasting strategies of osmotic and ionic regulation in freshwater crabs and shrimps: gene expression of gill ion transporters. The Journal of Experimental Biology 224: jeb233890. doi:10.1242/jeb.233890

Maraschi, A., S. Faria, and J. McNamara. 2021. Salt transport by the gill Na+-K+-2Cl− symporter in palaemonid shrimps: exploring physiological, molecular and evolutionary landscapes. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology 257:110968. doi: 10.1016/j.cbpa.2021.110968

McCormick, S. D., M. L. Taylor, and A. M. Regish. 2020. Cortisol is an osmoregulatory and glucose-regulating hormone in Atlantic sturgeon, a basal ray-finned fish. J Exp Biol 223 (Pt 18):jeb220251. doi:10.1242/jeb.220251

Miller, E. C. 2021. Comparing diversification rates in lakes, rivers, and the sea. Evolution 75:2055-2073. doi: 10.1111/evo.14295

Miller, E. C., K. T. Hayashi, D. Song, and J. J. Wiens. 2018. Explaining the ocean’s richest biodiversity hotspot and global patterns of fish diversity. Proceedings of the Royal Society Biological Sciences Series B 285:20181314. doi: 10.1098/rspb.2018.1314

Miller, E. C., and C. Roman-Palacios. 2021. Evolutionary time best explains the latitudinal diversity gradient of living freshwater fish diversity. Global Ecology and Biogeography 30:749-763. doi: 10.1111/geb.13253

Mucciolo, S., A. Desiderato, S. M. Leal, M. Mastrodonato, P. Lana, and C. A. Freire. 2021. Variability in the degree of euryhalinity of neotropical estuarine annelids. Journal of Experimental Marine Biology and Ecology 544:151617. doi: 10.1016/j.jembe.2021.151617

Nakov, T., J. M. Beaulieu, and A. J. Alverson. 2019. Diatoms diversify and turn over faster in freshwater than marine environments. Evolution; international journal of organic evolution 73:2497-2511. doi: 10.1111/evo.13832

Nakov, T., K. J. Judy, K. M. Downey, E. C. Ruck, and A. J. Alverson. 2020. Transcriptional Response of Osmolyte Synthetic Pathways and Membrane Transporters in a Euryhaline Diatom During Long-term Acclimation to a Salinity Gradient. Journal of Phycology 56:1712-1728. doi: 10.1111/jpy.13061

Naldoni, J., B. Okamura, H. Hartikainen, L. L. Corrêa, and E. A. Adriano. 2021. Broad but restricted detection of malacosporeans in a Neotropical cradle of diversification. Parasitology 148:511-518. doi: 10.1017/S0031182020002322

Okamura, B., and A. Gruhl. 2021. Evolution, Origins and Diversification of Parasitic Cnidarians. Pages 109-152 in K. De Baets and J. W. Huntley, editors. The Evolution and Fossil Record of Parasitism: Identification and Macroevolution of Parasites. Springer International Publishing, Cham. doi: 10.1007/978-3-030-42484-8_4

Pinseel, E., T. Nakov, K. Van den Berge, K. Downey, K. Judy, O. Kourtchenko, A. Kremp, E. Ruck, C. Sjöqvist, M. Töpel, A. Godhe, and A. Alverson. 2021. Genotype-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline. bioRxiv. doi: 10.1101/2021.11.04.467364

Posavi, M., D. Gulisija, J. B. Munro, J. C. Silva, and C. E. Lee. 2020. Rapid evolution of genome-wide gene expression and plasticity during saline to freshwater invasions by the copepod Eurytemora affinis species complex. Molecular Ecology 29: 4835-4856. doi: 10.1111/mec.15681

Roberts Kingman, G. A., D. N. Vyas, F. C. Jones, S. D. Brady, H. I. Chen, K. Reid, M. Milhaven, T. S. Bertino, W. E. Aguirre, D. C. Heins, F. A. von Hippel, P. J. Park, M. Kirch, D. M. Absher, R. M. Myers, F. Di Palma, M. A. Bell, D. M. Kingsley, and K. R. Veeramah. 2021. Predicting future from past: The genomic basis of recurrent and rapid stickleback evolution. Science Advances 7:eabg5285. https://advances.sciencemag.org/content/advances/7/25/eabg5285.full.pdf

Ruggeri, P., E. Pasternak, and B. Okamura. 2019. To remain or leave: Dispersal variation and its genetic consequences in benthic freshwater invertebrates. Ecology and Evolution 9:12069-12088.https://doi.org/10.1002/ece3.5656

Salgado, J., C. D. Sayer, N. Willby, A. G. Baker, B. Goldsmith, S. McGowan, T. A. Davidson, P. Bexell, I. R. Patmore, and B. Okamura. 2021. Habitat heterogeneity enables spatial and temporal coexistence of native and invasive macrophytes in shallow lake landscapes. River Research and Applications 2021:1– 13. https://doi.org/10.1002/rra.3839

Shaughnessy, C. A., A. Barany, and S. D. McCormick. 2020. 11-Deoxycortisol controls hydromineral balance in the most basal osmoregulating vertebrate, sea lamprey (Petromyzon marinus). Scientific Reports 10:12148. doi:10.1038/s41598-020-69061-4

Shaughnessy, C. A., and S. D. McCormick. 2020. Functional characterization and osmoregulatory role of the Na+-K+-2Cl− cotransporter in the gill of sea lamprey (Petromyzon marinus), a basal vertebrate. American Journal of Physiology-Regulatory, Integrative and Comparative Physiology 318:R17-R29. doi:10.1152/ajpregu.00125.2019

Shillito, A. P., and N. S. Davies. 2020. The Tumblagooda Sandstone revisited: exceptionally abundant trace fossils and geological outcrop provide a window onto Palaeozoic littoral habitats before invertebrate terrestrialization. Geological Magazine 157:1939-1970. doi:10.1017/S0016756820000199

Shillito, A. P., and N. S. Davies. 2021. The Silurian inception of inland desert ecosystems: trace fossil evidence from the Mereenie Sandstone, Northern Territory, Australia. Journal of the Geological Society 178. doi:10.1144/jgs2020-243

Smith, S. E., E. P. Palkovacs, B. C. Weidel, D. B. Bunnell, A. W. Jones, and D. D. Bloom. 2020. A century of intermittent eco-evolutionary feedbacks resulted in novel trait combinations in invasive Great Lakes alewives (Alosa pseudoharengus). Evolutionary Applications 13:2630-2645. doi: 10.1111/eva.13063

Solórzano, E. J., L. A. Buatois, W. J. Rodríguez, and M. G. Mángano. 2021. Sedimentary facies of a tide-dominated estuary and deltaic complex in a tropical setting: The middle Miocene Oficina Formation of the Orinoco Oil Belt, Venezuela. Journal of South American Earth Sciences:103515. doi: 10.1016/j.jsames.2021.103515

Stern, D. B., and C. E. Lee. 2020. Evolutionary origins of genomic adaptations in an invasive copepod. Nature Ecology & Evolution 4:1084-1094. doi: 10.1038/s41559-020-1201-y

Thomas, G. W. C., E. Dohmen, D. S. T. Hughes, S. C. Murali, M. Poelchau, K. Glastad, C. A. Anstead, N. A. Ayoub, P. Batterham, M. Bellair, G. J. Binford, H. Chao, Y. H. Chen, C. Childers, H. Dinh, H. V. Doddapaneni, J. J. Duan, S. Dugan, L. A. Esposito, M. Friedrich, J. Garb, R. B. Gasser, M. A. D. Goodisman, D. E. Gundersen-Rindal, Y. Han, A. M. Handler, M. Hatakeyama, L. Hering, W. B. Hunter, P. Ioannidis, J. C. Jayaseelan, D. Kalra, A. Khila, P. K. Korhonen, C. E. Lee, S. L. Lee, Y. Li, A. R. I. Lindsey, G. Mayer, A. P. McGregor, D. D. McKenna, B. Misof, M. Munidasa, M. Munoz-Torres, D. M. Muzny, O. Niehuis, N. Osuji-Lacy, S. R. Palli, K. A. Panfilio, M. Pechmann, T. Perry, R. S. Peters, H. C. Poynton, N.-M. Prpic, J. Qu, D. Rotenberg, C. Schal, S. D. Schoville, E. D. Scully, E. Skinner, D. B. Sloan, R. Stouthamer, M. R. Strand, N. U. Szucsich, A. Wijeratne, N. D. Young, E. E. Zattara, J. B. Benoit, E. M. Zdobnov, M. E. Pfrender, K. J. Hackett, J. H. Werren, K. C. Worley, R. A. Gibbs, A. D. Chipman, R. M. Waterhouse, E. Bornberg-Bauer, M. W. Hahn, and S. Richards. 2020. Gene content evolution in the arthropods. Genome Biology 21:15. doi: 10.1186/s13059-019-1925-7

Varejão, F., L. Warren, M. Simoes, L. Buatois, M. Mangano, A. Bahniuk, and M. Assine. 2021. Mixed siliciclastic–carbonate sedimentation in an evolving epicontinental sea: Aptian record of marginal marine settings in the interior basins of north‐eastern Brazil. Sedimentology 68: 2125–2164. doi: 10.1111/sed.12846

Verleyen, E., B. Van de Vijver, B. Tytgat, E. Pinseel, D. A. Hodgson, K. Kopalová, S. L. Chown, E. Van Ranst, S. Imura, S. Kudoh, W. Van Nieuwenhuyze, ANTDIAT consortium, K. Sabbe, and W. Vyverman. 2021. Diatoms define a novel freshwater biogeography of the Antarctic. Ecography 44:548-560. doi: 10.1111/ecog.05374